BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012A02LP1|AL426296
(784 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1305 1549 0.0
>3x_Contig1305
Length = 9229
Score = 1549 bits (780), Expect = 0.0
Identities = 782/784 (99%)
Strand = Plus / Minus
Query: 1 ataatttgctattctgttccagctgcctatttgtacaagccagcaccaccaccacaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1860 ataatttgctattctgttccagctgcctatttgtacaagccagcaccaccaccacaacaa 1801
Query: 61 ccgccaccttgggccgccagtgtctttttagtagtcttgatagtttcgttgtcacccaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1800 ccgccaccttgggccgccagtgtctttttagtagtcttgatagtttcgttgtcacccaat 1741
Query: 121 tcagtgtccttatggatgttcaagtgatatttgtcatccttagtcctcttaccttgaacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1740 tcagtgtccttatggatgttcaagtgatatttgtcatccttagtcctcttaccttgaacg 1681
Query: 181 acattttgtcttagaaactgtgcaacatcgttcataagcttgatctgttgatcaggtgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1680 acattttgtcttagaaactgtgcaacatcgttcataagcttgatctgttgatcaggtgga 1621
Query: 241 agctctggatttggtggattgaccatgctttctctcatctgttgtcttgctgccattagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1620 agctctggatttggtggattgaccatgctttctctcatctgttgtcttgctgccattagc 1561
Query: 301 atgcgcaagtctcctttaaaagcaacgcgggcggctctcaacccgtttctgtaagctccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1560 atgcgcaagtctcctttaaaagcaacgcgggcggctctcaacccgtttctgtaagctccg 1501
Query: 361 agcgcttgagacatctcgtgtttaatatataaggatctaggtgacttagtttgaagcttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1500 agcgcttgagacatctcgtgtttaatatataaggatctaggtgacttagtttgaagcttt 1441
Query: 421 actatacggttttctttgtcttatgagactcttctctgtctagttatcacagttgatatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1440 actatacggttttctttgtcttatgagactcttctctgtctagttatcacagttgatatt 1381
Query: 481 cgccattctcatttatatatatatdtttttttgttcatattgaagaaaaaagaaaactgc 540
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1380 cgccattctcatttatatatatatttttttttgttcatattgaagaaaaaagaaaactgc 1321
Query: 541 ataatatagtaaactgtcgccagagaatgttacaaacgacggaaccaacaatcagccgag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1320 ataatatagtaaactgtcgccagagaatgttacaaacgacggaaccaacaatcagccgag 1261
Query: 601 tgtagcaacatctgcggtacttgatggattgtcccattaaggttactttctaatgcttgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 tgtagcaacatctgcggtacttgatggattgtcccattaaggttactttctaatgcttgc 1201
Query: 661 gcgtgtgtctgtatttatgtatgagttcatgtgtwaatttcttgtaagaagaatggtaag 720
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1200 gcgtgtgtctgtatttatgtatgagttcatgtgtaaatttcttgtaagaagaatggtaag 1141
Query: 721 atatatgagataaagtattggcatatctcttcatcttatgaagacaaagctcgagtgatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 atatatgagataaagtattggcatatctcttcatcttatgaagacaaagctcgagtgatg 1081
Query: 781 cata 784
||||
Sbjct: 1080 cata 1077
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8031
Number of Sequences: 1807
Number of extensions: 8031
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 1
length of query: 784
length of database: 10,358,551
effective HSP length: 16
effective length of query: 768
effective length of database: 10,329,639
effective search space: 7933162752
effective search space used: 7933162752
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)